pr2database
The protist reference database keeps widening past the rRNA gene it was built on.
Comparison · Infra & APIs
campsismod vs jSDM
A side-by-side editorial comparison of campsismod and jSDM — release velocity, themes, recent moves, and the top alternatives to consider.
campsismod vs jSDM: at a glance
What is campsismod?
The model layer under Campsis, renamed in step with it and increasingly JSON-addressable.
Campsismod holds the model object layer for the Campsis pharmacometric simulation suite: reading, editing and writing model definitions that Campsis then simulates. Its recent releases track a single programme, adding a JSON route into model objects and then renaming the whole API to snake_case in 1.4.0, a week before Campsis 1.9.0 did the same. Release notes are terse issue lists, so the reasoning behind each change has to be read from the sibling package.
What is jSDM?
Joint species distribution models in Gibbs-sampled C++, quiet since 2023.
jSDM fits joint species distribution models by Gibbs sampling, with the sampler written in C++ against GSL and Armadillo and exposed through binomial probit, binomial logit, Poisson log and Gaussian entry points. The 0.2 line extended it with species traits, constrained factor loadings and residual-association plots. The one entry since 2023 carries only a compare link.
campsismod vs jSDM: editorial side-by-side
campsismod
2.5INFRA · APIS
The model layer under Campsis, renamed in step with it and increasingly JSON-addressable.
◆ Current state
Campsismod holds the model object layer for the Campsis pharmacometric simulation suite: reading, editing and writing model definitions that Campsis then simulates. Its recent releases track a single programme, adding a JSON route into model objects and then renaming the whole API to snake_case in 1.4.0, a week before Campsis 1.9.0 did the same. Release notes are terse issue lists, so the reasoning behind each change has to be read from the sibling package.
◆ Where it's heading
This package moves when Campsis needs it to move. The JSON constructor landed here in 1.3.0 and reached Campsis datasets a day later; parameter uncertainty generation was handed down from Campsis in that package's 1.6.0; and the snake_case migration started here before propagating up. That ordering makes Campsismod the place where suite-wide interface decisions are taken first, even though the visible payoff shows up in Campsis.
◆ Prediction
Expect Campsismod to keep absorbing model-level responsibilities that Campsis currently handles, and to extend the JSON mapping to whatever parts of the model object it does not yet cover. The entries give no signal on a 2.0, and with the rename already spent there is little reason to expect one soon.
jSDM
0.0INFRA · APIS
Joint species distribution models in Gibbs-sampled C++, quiet since 2023.
◆ Current state
jSDM fits joint species distribution models by Gibbs sampling, with the sampler written in C++ against GSL and Armadillo and exposed through binomial probit, binomial logit, Poisson log and Gaussian entry points. The 0.2 line extended it with species traits, constrained factor loadings and residual-association plots. The one entry since 2023 carries only a compare link.
◆ Where it's heading
The package built out its model family quickly and then stopped: five of the six visible entries are stamped the same day as a backfilled archive, and the only later release says nothing about its contents. The direction the 0.2 line was heading, toward trait-mediated species effects and better convergence on latent variable models, has no visible continuation.
◆ Prediction
The feed does not support a confident prediction; the latest entry publishes no notes, so whether the package is still developing or only being kept CRAN-clean cannot be read from it.
Alternatives to campsismod and jSDM
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either campsismod or jSDM.
ggalign
Composable aligned layouts, rebuilt on S7 while ggplot2 4.0 lands underneath.
prioritizr
Conservation planning absorbs the literature's target-setting rules as code.
rsofun
An ecosystem model starts tracking carbon isotopes and land-use change.
usmap
Ten years in, US mapping splits its data out and finally adds Puerto Rico.
trackeR
Fitness-tracking analysis in slow maintenance, still absorbing upstream breakage.
See all campsismod alternatives → · See all jSDM alternatives →
Recent activity from campsismod and jSDM
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 21d agocampsismodsnake_case migration lands here first
- 3mo agocampsismodBundled model suite refreshed
- 5mo agocampsismodJSON argument added to the CampsisModel constructor
- 7mo agocampsismodJSON import for Campsis models
- 9mo agojSDMjSDM CRAN release v0.2.7: Joint Species Distribution Models
- 1y agocampsismodreplaceAll fixed for unrecognised statements
- 1y agocampsismodPerformance tests skipped on CRAN
- 3y agojSDMSpecies traits, constrained loadings and association plots
- 3y agojSDMFirst release: C++ Gibbs sampler for joint species models ⚡
- 3y agojSDMResidual correlation functions can filter to significant values
- 3y agojSDMjSDM_gaussian() fits continuous data with overdispersion
- 3y agojSDMFour versions of CRAN check corrections
Frequently asked questions
What is the difference between campsismod and jSDM?
They serve adjacent needs but don't currently overlap on shipped themes. campsismod is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is campsismod better than jSDM?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. campsismod is currently shipping more aggressively (velocity 2.5 vs 0.0), with 0 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
What are the best alternatives to campsismod?
Top campsismod alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "campsismod alternatives" section above for the current picks, or visit /alternatives/campsismod for the full list with editorial commentary on each.
What are the best alternatives to jSDM?
Top jSDM alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "jSDM alternatives" section above for the current picks, or visit /alternatives/jsdm for the full list with editorial commentary on each.