pr2database
The protist reference database keeps widening past the rRNA gene it was built on.
Comparison · Infra & APIs
coga vs rsofun
A side-by-side editorial comparison of coga and rsofun — release velocity, themes, recent moves, and the top alternatives to consider.
coga vs rsofun: at a glance
What is coga?
A gamma-convolution density package that reached completion in 2018 and has coasted since.
coga computes densities, distribution functions and random numbers for convolutions of gamma distributions, with the numerical work in C++ through Rcpp. It has been feature-complete since 1.0.0 in 2018, and every release in the seven years since has been maintenance: a documentation alias for CRAN, a compiler warning, a maintainer email change, and an Rcpp update requiring Rf_error calls to be guarded. The one functional addition in that period, in 1.1.0, was an unexported function added explicitly for research use.
What is rsofun?
An ecosystem model starts tracking carbon isotopes and land-use change.
rsofun wraps the P-model and BiomeE vegetation models in R with Fortran cores, covering photosynthesis, water balance and forest demography, plus Bayesian calibration. The 5.1.0 release is the first in the window to widen what the models simulate rather than reorganise them. Before it, the history is renaming, cost-function rewrites and output-format consistency work.
coga vs rsofun: editorial side-by-side
coga
0.0INFRA · APIS
A gamma-convolution density package that reached completion in 2018 and has coasted since.
◆ Current state
coga computes densities, distribution functions and random numbers for convolutions of gamma distributions, with the numerical work in C++ through Rcpp. It has been feature-complete since 1.0.0 in 2018, and every release in the seven years since has been maintenance: a documentation alias for CRAN, a compiler warning, a maintainer email change, and an Rcpp update requiring Rf_error calls to be guarded. The one functional addition in that period, in 1.1.0, was an unexported function added explicitly for research use.
◆ Where it's heading
This is a finished package being kept alive rather than developed. The releases track external pressure exactly: CRAN documentation requirements, compiler warnings, Rcpp API changes. Its maintenance is visibly shared with smam, the same maintainer's animal-movement package, which received the same email update, the same format-security fix and the same Rcpp guard within a minute or twenty of coga each time. Neither package is being extended; both are being kept installable.
◆ Prediction
Expect nothing but CRAN and toolchain maintenance, arriving whenever Rcpp or R's check requirements change, and arriving alongside smam. There is no signal in these entries of planned functional work.
rsofun
0.0INFRA · APIS
An ecosystem model starts tracking carbon isotopes and land-use change.
◆ Current state
rsofun wraps the P-model and BiomeE vegetation models in R with Fortran cores, covering photosynthesis, water balance and forest demography, plus Bayesian calibration. The 5.1.0 release is the first in the window to widen what the models simulate rather than reorganise them. Before it, the history is renaming, cost-function rewrites and output-format consistency work.
◆ Where it's heading
The direction is from a calibration harness toward a model that can answer different questions: isotope fractionation now comes out of the P-model, BiomeE handles land use and land-use change, and forcing can be recycled when a simulation outruns its data. Version stamps are unreliable here, with a v5.0 tag carrying only a build fix and predating v4.4, so the arc reads better through content than through numbering.
◆ Prediction
The isotope work is explicitly unfinished, with a constant atmospheric signature standing in for daily d13c forcing, so the next likely step is accepting that as model input.
Alternatives to coga and rsofun
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either coga or rsofun.
ggalign
Composable aligned layouts, rebuilt on S7 while ggplot2 4.0 lands underneath.
prioritizr
Conservation planning absorbs the literature's target-setting rules as code.
jSDM
Joint species distribution models in Gibbs-sampled C++, quiet since 2023.
usmap
Ten years in, US mapping splits its data out and finally adds Puerto Rico.
trackeR
Fitness-tracking analysis in slow maintenance, still absorbing upstream breakage.
Recent activity from coga and rsofun
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 5mo agocogaRcpp attributes regenerated; email updated
- 10mo agorsofunCarbon isotope tracking and LULUC support across both models ⚡
- 1y agorsofunLM3-PPA renamed BiomeE; cost function and stress functions rewritten
- 1y agorsofunParallel make fix on the v5.0 tag
- 2y agocogaMaintainer email updated
- 2y agocogaCompiler format-security warning resolved
- 2y agorsofuncnmodel 0.1 research snapshot tag
- 3y agocogaPackage documentation alias added for CRAN
- 4y agorsofunFortran crash guards and consistent P-model variable names
- 4y agorsofunPublic release following a code refactor
- 6y agocogaUnexported density variant added for research use
- 8y agocoga1.0.0 declares the package complete and documented
Frequently asked questions
What is the difference between coga and rsofun?
They serve adjacent needs but don't currently overlap on shipped themes. coga and rsofun are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is coga better than rsofun?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. coga and rsofun are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
What are the best alternatives to coga?
Top coga alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "coga alternatives" section above for the current picks, or visit /alternatives/coga for the full list with editorial commentary on each.
What are the best alternatives to rsofun?
Top rsofun alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "rsofun alternatives" section above for the current picks, or visit /alternatives/rsofun for the full list with editorial commentary on each.