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Comparison · Infra & APIs
goat vs rollupTree
A side-by-side editorial comparison of goat and rollupTree — release velocity, themes, recent moves, and the top alternatives to consider.
goat vs rollupTree: at a glance
What is goat?
A gene-set enrichment package that outgrew its human-only origins, then went quiet.
GOAT is a CRAN-published R package for gene set enrichment testing, now at 1.1.4. The visible arc runs from a 2024 beta through a first public CRAN release to a 1.1 line that broadened the package past human gene sets and added persistence for completed analyses. Recent releases are small: the newest ships an igraph handle on plot_network() plus bug fixes.
What is rollupTree?
The recursive-computation engine under massProps grows the accessors its consumer needed
rollupTree performs recursive computations over tree and DAG structures — the generic engine that its author's massProps package uses to roll mass properties up an assembly breakdown. It is small and moves slowly: five releases in a year, of which two are README and vignette work. The current surface added row-level get and set accessors by key and by id at 0.4.0.
goat vs rollupTree: editorial side-by-side
goat
0.0INFRA · APIS
A gene-set enrichment package that outgrew its human-only origins, then went quiet.
◆ Current state
GOAT is a CRAN-published R package for gene set enrichment testing, now at 1.1.4. The visible arc runs from a 2024 beta through a first public CRAN release to a 1.1 line that broadened the package past human gene sets and added persistence for completed analyses. Recent releases are small: the newest ships an igraph handle on plot_network() plus bug fixes.
◆ Where it's heading
The substantive expansion happened in the 1.1 cycle; everything since has been maintenance and plotting ergonomics. Each release since 1.1 touches one function and returns something callers previously had to reconstruct, which reads as a package settling into a stable API and responding to individual user requests rather than pursuing new scope. The 13-month gap between 1.1.2 and 1.1.4 puts it firmly in low-cadence maintenance.
◆ Prediction
Expect continued point releases that expose internals from the plotting functions or refresh the bundled GO release, not new analysis capability. The entries give no signal of a planned 1.2.
rollupTree
0.0INFRA · APIS
The recursive-computation engine under massProps grows the accessors its consumer needed
◆ Current state
rollupTree performs recursive computations over tree and DAG structures — the generic engine that its author's massProps package uses to roll mass properties up an assembly breakdown. It is small and moves slowly: five releases in a year, of which two are README and vignette work. The current surface added row-level get and set accessors by key and by id at 0.4.0.
◆ Where it's heading
The package develops in response to its one visible consumer. The 0.4.0 accessors appeared in January 2026 and massProps switched to them thirteen days later; 0.4.1 then fixed missing column names in the setters, which is the kind of defect only real use surfaces. Before that, 0.3.0's default_validate_dag() extended validation past strict trees to directed acyclic graphs, widening what structures the engine will accept.
◆ Prediction
On the established pattern the next release will be whatever massProps needs next, discovered by using it. A DAG validator suggests non-tree structures are in scope, but nothing in these notes says that path is being pushed further.
Alternatives to goat and rollupTree
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either goat or rollupTree.
PINstimation
A market-microstructure toolkit that keeps adding estimators as the papers land.
nzilbb.vowels
A vowel-analysis package trimming dependencies after an email address got it archived.
emuR
The R half of the EMU speech database system, fixing what was quietly broken.
BAS
A Bayesian model-averaging package spending its 2.0 on memory, not methods.
tidyplots
tidyplots keeps rebuilding its own foundations rather than layering around them.
See all goat alternatives → · See all rollupTree alternatives →
Recent activity from goat and rollupTree
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 6mo agorollupTreeMissing column names in the new row setters
- 6mo agorollupTreeRow-level get and set accessors by key and by id
- 6mo agogoatplot_network() now hands back the igraph object
- 1y agorollupTreeMinor vignette improvements
- 1y agorollupTreeBadges and GitHub Actions added to the README
- 1y agorollupTreedefault_validate_dag() extends validation past strict trees
- 1y agogoatFix for a reduce_genesets() infinite loop
- 1y agogoatGene sets beyond human, and analyses you can reload ⚡
- 2y agogoatFirst public release, now on CRAN ⚡
- 2y agogoatplot_lollipop() gains barplots and an effect-size axis
- 2y agogoatBeta 0.9.5 tagged, with no changes described
Frequently asked questions
What is the difference between goat and rollupTree?
They serve adjacent needs but don't currently overlap on shipped themes. goat and rollupTree are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is goat better than rollupTree?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. goat and rollupTree are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
What are the best alternatives to goat?
Top goat alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "goat alternatives" section above for the current picks, or visit /alternatives/goat for the full list with editorial commentary on each.
What are the best alternatives to rollupTree?
Top rollupTree alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "rollupTree alternatives" section above for the current picks, or visit /alternatives/rolluptree for the full list with editorial commentary on each.