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Joint species distribution models in Gibbs-sampled C++, quiet since 2023.
Comparison · Infra & APIs
ncmR vs sits
A side-by-side editorial comparison of ncmR and sits — release velocity, themes, recent moves, and the top alternatives to consider.
ncmR vs sits: at a glance
What is ncmR?
Three weeks from first CRAN submission to a point-and-click neutral community model
ncmR fits the neutral community model to microbiome and ecological abundance data. The whole feed is three weeks long: fit_ncm() and summary methods at 0.1.0 on 1 April, a scatter plot with fitted curve and confidence interval at 0.2.0, then a Shiny application wrapping both at 0.3.0, then a row-name bugfix. It is a new package moving fast in its first month.
What is sits?
An R package for satellite time series just grew a Python API.
sits classifies satellite image time series — building data cubes from cloud archives, training deep learning models on them, and producing land-cover maps. The releases here are dense feature lists in a steady 1.5.x line, and two themes recur in every one: more source collections wired in, and more of the classification pipeline made parallel or chunked. Version 1.5.3 added pysits, a Python API onto the same engine.
ncmR vs sits: editorial side-by-side
ncmR
0.0INFRA · APIS
Three weeks from first CRAN submission to a point-and-click neutral community model
◆ Current state
ncmR fits the neutral community model to microbiome and ecological abundance data. The whole feed is three weeks long: fit_ncm() and summary methods at 0.1.0 on 1 April, a scatter plot with fitted curve and confidence interval at 0.2.0, then a Shiny application wrapping both at 0.3.0, then a row-name bugfix. It is a new package moving fast in its first month.
◆ Where it's heading
The direction is toward users who do not write R. Version 0.2.0 added plotting, 0.3.0 wrapped fitting and plotting in Shiny modules, and the same release deleted the Unicode plotting helpers introduced one version earlier because the dependency they existed for was removed. That willingness to throw away a week-old API suggests the surface is still being negotiated rather than settled.
◆ Prediction
With a fitting module and a plotting module in the app, the remaining gap is getting results back out — export of fitted parameters or figures from the Shiny session. The bugfix at 0.3.1 was in file upload, which is where a GUI's problems usually start.
sits
0.0INFRA · APIS
An R package for satellite time series just grew a Python API.
◆ Current state
sits classifies satellite image time series — building data cubes from cloud archives, training deep learning models on them, and producing land-cover maps. The releases here are dense feature lists in a steady 1.5.x line, and two themes recur in every one: more source collections wired in, and more of the classification pipeline made parallel or chunked. Version 1.5.3 added pysits, a Python API onto the same engine.
◆ Where it's heading
The package is positioning itself as the interface layer to Earth observation archives rather than as an algorithm library. Each release absorbs another provider — Planetary Computer, Digital Earth Africa and Australia, CDSE, TERRASCOPE, Open Geo Hub, PLANET — so the differentiator is coverage and the uniform cube abstraction over it. The Python API extends the same logic to the language most of that community actually works in. Alongside, the work is increasingly about scale: chunk parallelisation, multicores sampling, GPU classification, WebGL rendering.
◆ Prediction
With collections still being added release over release, expect more providers and continued performance work on the classification and regularisation paths. The open question the entries do not answer is how far pysits tracks the R API, since it appears once and is not mentioned again in later releases.
Alternatives to ncmR and sits
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either ncmR or sits.
rsofun
An ecosystem model starts tracking carbon isotopes and land-use change.
usmap
Ten years in, US mapping splits its data out and finally adds Puerto Rico.
trackeR
Fitness-tracking analysis in slow maintenance, still absorbing upstream breakage.
states
State-panel tooling holding steady since its 2020 data and ergonomics release.
multimark
Five years of compiler and CRAN fixes on a capture-recapture package.
Recent activity from ncmR and sits
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 4mo agoncmRRow names preserved during file upload conversion
- 4mo agoncmRA Shiny app for fitting and plotting neutral community models ⚡
- 4mo agoncmRScatter plot with fitted curve and confidence interval
- 4mo agoncmRFirst CRAN submission: neutral community model fitting in R ⚡
- 7mo agositsSNIC segmentation, imputation helpers and QGIS palette export
- 8mo agositsOne-line hotfix for a CRAN compiler requirement
- 11mo agositsHotfix: TAE embeddings, MPC token handling, texture divide-by-zero
- 11mo agositsA Python API arrives, alongside SAR texture measures ⚡
- 1y agositsExclusion masks, multiple tiling systems and faster segment classification
- 1y agositsFour more archives wired in, including Digital Earth Africa
Frequently asked questions
What is the difference between ncmR and sits?
They serve adjacent needs but don't currently overlap on shipped themes. ncmR and sits are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is ncmR better than sits?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. ncmR and sits are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
What are the best alternatives to ncmR?
Top ncmR alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "ncmR alternatives" section above for the current picks, or visit /alternatives/ncmr for the full list with editorial commentary on each.
What are the best alternatives to sits?
Top sits alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "sits alternatives" section above for the current picks, or visit /alternatives/sits for the full list with editorial commentary on each.