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Comparison · Infra & APIs
pr2database vs samplr
A side-by-side editorial comparison of pr2database and samplr — release velocity, themes, recent moves, and the top alternatives to consider.
pr2database vs samplr: at a glance
What is pr2database?
The protist reference database keeps widening past the rRNA gene it was built on.
PR2 curates ribosomal reference sequences for eukaryotes, distributed as flat files and through a web interface, with each release crediting the specialists who curated individual clades. Since 2022 the structural changes have outweighed the curation: one combined SSU database replaced the separate ones, the taxonomy moved from eight levels to nine, and companion databases for ribosomal operons, mixoplankton and mitochondrial COI have been linked in.
What is samplr?
A cognitive-science sampling package ships once, then goes quiet for eighteen months
samplr compares human performance against sampling algorithms, giving cognitive scientists the MCMC machinery to test whether people behave like samplers. Its entire public history is three releases: a 1.0.0 in August 2024, a floating-point fix eighteen seconds later, and then nothing until a February 2026 patch. The release notes are unusually thin even by CRAN standards.
pr2database vs samplr: editorial side-by-side
pr2database
0.0INFRA · APIS
The protist reference database keeps widening past the rRNA gene it was built on.
◆ Current state
PR2 curates ribosomal reference sequences for eukaryotes, distributed as flat files and through a web interface, with each release crediting the specialists who curated individual clades. Since 2022 the structural changes have outweighed the curation: one combined SSU database replaced the separate ones, the taxonomy moved from eight levels to nine, and companion databases for ribosomal operons, mixoplankton and mitochondrial COI have been linked in.
◆ Where it's heading
The database is becoming a hub rather than a single file. Each recent release integrates something maintained elsewhere, with the ROD, EukRibo, Mixoplankton and now eKOI databases reachable through the same interface, while the SSU flat files themselves change little between versions. Curation continues underneath, clade by clade, at a pace set by which specialist contributed that cycle.
◆ Prediction
Expect the next release to integrate or refresh another linked database while the SSU files see routine curation, following the pattern of the last three.
samplr
0.0INFRA · APIS
A cognitive-science sampling package ships once, then goes quiet for eighteen months
◆ Current state
samplr compares human performance against sampling algorithms, giving cognitive scientists the MCMC machinery to test whether people behave like samplers. Its entire public history is three releases: a 1.0.0 in August 2024, a floating-point fix eighteen seconds later, and then nothing until a February 2026 patch. The release notes are unusually thin even by CRAN standards.
◆ Where it's heading
The feed shows a package that shipped and stopped. The 2024 tags were both created in one sitting and say almost nothing; the 2026 release is a row-count bug in Mean_Variance() bundled with citation metadata, a dropped dependency and http-to-https link fixes — the housekeeping profile of a package being kept alive for the paper that cites it rather than actively developed.
◆ Prediction
Adding citation information to the README is usually the move of a maintainer expecting the package to be referenced rather than extended. On this cadence the next release is more likely another CRAN-hygiene patch than new algorithms; there is not enough in these notes to say otherwise.
Alternatives to pr2database and samplr
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either pr2database or samplr.
prioritizr
Conservation planning absorbs the literature's target-setting rules as code.
jSDM
Joint species distribution models in Gibbs-sampled C++, quiet since 2023.
rsofun
An ecosystem model starts tracking carbon isotopes and land-use change.
usmap
Ten years in, US mapping splits its data out and finally adds Puerto Rico.
trackeR
Fitness-tracking analysis in slow maintenance, still absorbing upstream breakage.
See all pr2database alternatives → · See all samplr alternatives →
Recent activity from pr2database and samplr
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 5mo agosamplrMean_Variance() row count corrected after eighteen months
- 9mo agopr2databaseeKOI mitochondrial COI database reachable from the interface
- 1y agopr2databaseRibosomal Operon Database 1.2 integrated; ten clades curated
- 1y agosamplrFloating point comparison fix
- 1y agosamplrsamplr 1.0.0
- 2y agopr2databaseTaxonomy restructured from eight levels to nine ⚡
- 3y agopr2databaseNew web interface at app.pr2-database.org
- 4y agopr2databaseOne SSU database for nuclear, organelle and bacterial sequences ⚡
- 5y agopr2database2,966 sequences added and 3,817 removed across four clades
Frequently asked questions
What is the difference between pr2database and samplr?
They serve adjacent needs but don't currently overlap on shipped themes. pr2database and samplr are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is pr2database better than samplr?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. pr2database and samplr are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
What are the best alternatives to pr2database?
Top pr2database alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "pr2database alternatives" section above for the current picks, or visit /alternatives/pr2database for the full list with editorial commentary on each.
What are the best alternatives to samplr?
Top samplr alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "samplr alternatives" section above for the current picks, or visit /alternatives/samplr for the full list with editorial commentary on each.