vcfR
A genomics workhorse whose visible release feed stops dead in mid-2020.
A side-by-side editorial comparison of prospectr and trackeR — release velocity, themes, recent moves, and the top alternatives to consider.
prospectr spent its biggest release in years fixing spectra it had been quietly mangling.
prospectr provides the signal-processing layer for near-infrared and visible spectroscopy in R — Savitzky-Golay and gap-segment derivatives, standard normal variate, detrending, continuum removal, splice correction, plus calibration sampling algorithms like Kennard-Stone and DUPLEX and readers for ASD and BUCHI NIRCal instrument files. The May release is the substantial one: a long list of corrections to functions that were returning wrong or missing values rather than failing.
Fitness-tracking analysis in slow maintenance, still absorbing upstream breakage.
trackeR reads GPS and fitness-tracker files in TCX, GPX and JSON form and turns them into session data, distribution and concentration profiles, and route plots. Feature work concentrated in the 1.5 series in 2019; the two releases since are corrective. The latest swaps the plot layout dependencies for patchwork and fixes plot_route() returning nothing.
prospectr provides the signal-processing layer for near-infrared and visible spectroscopy in R — Savitzky-Golay and gap-segment derivatives, standard normal variate, detrending, continuum removal, splice correction, plus calibration sampling algorithms like Kennard-Stone and DUPLEX and readers for ASD and BUCHI NIRCal instrument files. The May release is the substantial one: a long list of corrections to functions that were returning wrong or missing values rather than failing.
The recent work is corrective rather than additive, and several items changed results silently before being caught. continuumRemoval() derived its convex-hull boundary offset from a fixed one-wavelength assumption that broke for fine-resolution spectra or non-nanometre units; cochranTest() passed an invalid argument name to prcomp() and produced incorrect principal component scores; readASD() silently dropped spectra in one branch of its text path. Two file readers were leaking connections. Alongside that runs a smaller thread of decoupling preprocessing steps from each other, most visibly detrend() gaining an snv argument so polynomial detrending can run without the SNV transform that Barnes et al. bundled with it.
The detrend() decoupling is the only recent addition and it fits a broader pipeline-composition direction, so similar separation of other bundled preprocessing steps is the plausible next move. The misspelled substraction argument now carries a deprecation warning, which schedules its removal for a future release.
trackeR reads GPS and fitness-tracker files in TCX, GPX and JSON form and turns them into session data, distribution and concentration profiles, and route plots. Feature work concentrated in the 1.5 series in 2019; the two releases since are corrective. The latest swaps the plot layout dependencies for patchwork and fixes plot_route() returning nothing.
Recent releases track other people's changes: ggmap moving to Stadia maps, gridExtra giving way to patchwork, a cadence field being read into the wrong column. The 2019 entries are where the analysis surface was built out, with cumulative elevation gain, compressed file reading and elevation-noise thresholds, and it has not moved much since.
Expect the next release to be another compatibility or parsing fix rather than a new metric.
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either prospectr or trackeR.
A genomics workhorse whose visible release feed stops dead in mid-2020.
The R phone-number package stopped only parsing numbers and started asking them where they are.
A Venn diagram package whose public release notes say almost nothing — including about its copyright cleanup.
A Shiny app for choosing the right ordinal test reached CRAN in a single 90-minute burst of tags.
A new R localization package that reached CRAN and immediately downgraded itself to experimental.
An R client for HERE's location APIs, shaped almost entirely by what the vendor exposes next.
See all prospectr alternatives → · See all trackeR alternatives →
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
They serve adjacent needs but don't currently overlap on shipped themes. prospectr and trackeR are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. prospectr and trackeR are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
Top prospectr alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "prospectr alternatives" section above for the current picks, or visit /alternatives/prospectr for the full list with editorial commentary on each.
Top trackeR alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "trackeR alternatives" section above for the current picks, or visit /alternatives/tracker for the full list with editorial commentary on each.