Omni
Omni ships weekly, and almost every week the headline item is an AI feature.
Comparison · Analytics
glystats vs Holistics
A side-by-side editorial comparison of glystats and Holistics — release velocity, themes, recent moves, and the top alternatives to consider.
glystats vs Holistics: at a glance
What is glystats?
glystats keeps deleting analyses it decided belong somewhere else.
glystats provides the statistical tests behind glycoverse: differential analysis, clustering, dimensionality reduction, and until recently enrichment. The last four releases are mostly subtraction. WGCNA and consensus clustering were removed in 0.10.0 as too interactive for a pipeline package, the enrichment functions were deprecated in the same release and deleted in 0.11.0 in favor of glyfun, and 0.11.0 also removed every gly_*_() matrix and vector interface. What remains accepts SummarizedExperiment inputs.
What is Holistics?
Holistics is adding governance to the AI layer it spent the summer building.
Holistics ships small, frequent notes - often one or two sentences - covering three strands at once: AI features in Explore and Chat, as-code control over presentation through AML, and workspace hygiene like file history and dark mode. The August entries turn to the AI layer's edges rather than its capabilities, with an AI user attribute for restricting what the assistant can reach. Several entries are barely a line long, so scope frequently has to be read from the headline.
glystats vs Holistics: editorial side-by-side
glystats
0.0ANALYTICS
glystats keeps deleting analyses it decided belong somewhere else.
◆ Current state
glystats provides the statistical tests behind glycoverse: differential analysis, clustering, dimensionality reduction, and until recently enrichment. The last four releases are mostly subtraction. WGCNA and consensus clustering were removed in 0.10.0 as too interactive for a pipeline package, the enrichment functions were deprecated in the same release and deleted in 0.11.0 in favor of glyfun, and 0.11.0 also removed every gly_*_() matrix and vector interface. What remains accepts SummarizedExperiment inputs.
◆ Where it's heading
The package is narrowing on purpose. The through-line across removals is a refusal to support two calling conventions or two homes for the same analysis: containers only, no bare matrices; one enrichment implementation, in glyfun. The additive work in the window went to statistical rigor rather than surface area, with effect sizes added to the four main tests, sign bugs fixed, and the log2 pseudo-count reduced.
◆ Prediction
With the interface pruning finished, the next releases are more likely to deepen the tests that remain than to add new analysis families.
Holistics
5.0ANALYTICS
Holistics is adding governance to the AI layer it spent the summer building.
◆ Current state
Holistics ships small, frequent notes - often one or two sentences - covering three strands at once: AI features in Explore and Chat, as-code control over presentation through AML, and workspace hygiene like file history and dark mode. The August entries turn to the AI layer's edges rather than its capabilities, with an AI user attribute for restricting what the assistant can reach. Several entries are barely a line long, so scope frequently has to be read from the headline.
◆ Where it's heading
The AI work has moved through a recognizable sequence: capability first with chart suggestions, then observability with AI Chat Insights for admins, and now access control with an AI-specific user attribute. Alongside it, Holistics keeps pulling presentation into AML - custom charts, theme palettes, currency formats - so the things analysts used to click are versioned as code. File history is the join between the two threads, giving every dashboard, model, and dataset its own restorable timeline.
◆ Prediction
With capability, visibility, and access control now in place for the AI layer, the next step is likely audit or policy depth - logging what the assistant answered against which data - rather than new AI surfaces.
Alternatives to glystats and Holistics
Other Analytics products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either glystats or Holistics.
silx
silx settles into maintenance a release after its PySide6 migration
Plotly
Plotly is turning its cloud into a metered compute platform with an enterprise on-ramp.
aniread
aniread stops asking you to know which tracker wrote the file
Rho
Rho's release machinery finally produced a stable build — and it shipped no new product.
Usermaven
Usermaven closed the loop: data comes in from anywhere, and now it goes back out.
See all glystats alternatives → · See all Holistics alternatives →
Recent activity from glystats and Holistics
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 2d agoHolisticsAI user attribute restricts AI access to sensitive data
- 16d agoHolisticsCustom currency and unit formats, per field
- 19d agoHolisticsFile history: per-file version timeline and restore
- 22d agoHolisticsCustom charts become AML code with GUI authoring
- 23d agoHolisticsColor palettes can be assigned at the theme level
- 27d agoHolisticsDate-range presets and typed shorthands
- 1mo agoglystatsDocs recommend the new SE containers
- 1mo agoglystatsTests recognize both container types consistently
- 1mo agoglystatsMatrix interfaces and enrichment functions removed
- 3mo agoglystatsSmaller log2 pseudo-count across DEA and clustering
- 3mo agoglystatsWGCNA and clustering dropped, enrichment deprecated
- 4mo agoglystatsEffect sizes added and test statistic signs fixed
Frequently asked questions
What is the difference between glystats and Holistics?
They serve adjacent needs but don't currently overlap on shipped themes. Holistics is currently shipping more aggressively (velocity 5.0 vs 0.0), with 0 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is glystats better than Holistics?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. Holistics is currently shipping more aggressively (velocity 5.0 vs 0.0), with 0 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Analytics products to evaluate alongside.
What are the best alternatives to glystats?
Top glystats alternatives in Analytics are ranked by recent ship velocity. Browse the "glystats alternatives" section above for the current picks, or visit /alternatives/glystats for the full list with editorial commentary on each.
What are the best alternatives to Holistics?
Top Holistics alternatives in Analytics are ranked by recent ship velocity. Browse the "Holistics alternatives" section above for the current picks, or visit /alternatives/holistics for the full list with editorial commentary on each.