goat
A gene-set enrichment package that outgrew its human-only origins, then went quiet.
Comparison · Infra & APIs
mpactr vs rollupTree
A side-by-side editorial comparison of mpactr and rollupTree — release velocity, themes, recent moves, and the top alternatives to consider.
mpactr vs rollupTree: at a glance
What is mpactr?
mpactr spent two spring releases normalizing case in metadata after users kept tripping on it.
mpactr filters mass-spectrometry peak tables — removing contaminants, ion duplicates and low-reproducibility features before downstream metabolomics analysis — with a data.table and Rcpp core. Development is slow and the recent releases are small. The May pair both address the same friction: column names and imported table names arriving in inconsistent case and failing to match.
What is rollupTree?
The recursive-computation engine under massProps grows the accessors its consumer needed
rollupTree performs recursive computations over tree and DAG structures — the generic engine that its author's massProps package uses to roll mass properties up an assembly breakdown. It is small and moves slowly: five releases in a year, of which two are README and vignette work. The current surface added row-level get and set accessors by key and by id at 0.4.0.
mpactr vs rollupTree: editorial side-by-side
mpactr
0.0INFRA · APIS
mpactr spent two spring releases normalizing case in metadata after users kept tripping on it.
◆ Current state
mpactr filters mass-spectrometry peak tables — removing contaminants, ion duplicates and low-reproducibility features before downstream metabolomics analysis — with a data.table and Rcpp core. Development is slow and the recent releases are small. The May pair both address the same friction: column names and imported table names arriving in inconsistent case and failing to match.
◆ Where it's heading
The package is stabilizing its input contract rather than growing its filtering methods. Metadata column names are now forced lowercase inside import_data() regardless of how the file was written, imported peak_tables names not present in the injection column are lowercased too, and get_meta_data() was renamed to get_metadata() in the same pass. Before that the work was infrastructural — Rcpp introduced to speed up filtering, data.table moved from Depends to Imports, and memory errors cleared so the package passes Valgrind and both sanitizers. Note the earliest entry compares against a v1.0.0 tag that precedes 0.1.0 in the repository, so version ordering in this feed is not reliable.
◆ Prediction
The case-normalization work has now touched both metadata columns and peak table names across two consecutive releases, which suggests the input-matching problem is not fully closed and a third pass is plausible. Nothing in these entries points to new filtering methods.
rollupTree
0.0INFRA · APIS
The recursive-computation engine under massProps grows the accessors its consumer needed
◆ Current state
rollupTree performs recursive computations over tree and DAG structures — the generic engine that its author's massProps package uses to roll mass properties up an assembly breakdown. It is small and moves slowly: five releases in a year, of which two are README and vignette work. The current surface added row-level get and set accessors by key and by id at 0.4.0.
◆ Where it's heading
The package develops in response to its one visible consumer. The 0.4.0 accessors appeared in January 2026 and massProps switched to them thirteen days later; 0.4.1 then fixed missing column names in the setters, which is the kind of defect only real use surfaces. Before that, 0.3.0's default_validate_dag() extended validation past strict trees to directed acyclic graphs, widening what structures the engine will accept.
◆ Prediction
On the established pattern the next release will be whatever massProps needs next, discovered by using it. A DAG validator suggests non-tree structures are in scope, but nothing in these notes says that path is being pushed further.
Alternatives to mpactr and rollupTree
Other Infra & APIs products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either mpactr or rollupTree.
massProps
A mass-properties rollup spends a year on documentation and follows its sibling's API
writeAlizer
Six months of releases and not one of them touched the scoring models
samplr
A cognitive-science sampling package ships once, then goes quiet for eighteen months
stochvol
A Bayesian volatility sampler in its maintenance decade, paying for its own speed
midr
A black-box interpreter reaches CRAN, then learns multi-class and survival responses
See all mpactr alternatives → · See all rollupTree alternatives →
Recent activity from mpactr and rollupTree
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 3mo agompactrPeak table names lowercased when absent from the injection column
- 3mo agompactrMetadata column names forced lowercase; get_metadata() renamed
- 6mo agorollupTreeMissing column names in the new row setters
- 6mo agorollupTreeRow-level get and set accessors by key and by id
- 10mo agompactrValgrind and sanitizer memory issues cleared
- 1y agorollupTreeMinor vignette improvements
- 1y agorollupTreeBadges and GitHub Actions added to the README
- 1y agompactrRcpp added to speed up filtering; data.table moved to Imports
- 1y agorollupTreedefault_validate_dag() extends validation past strict trees
- 1y agompactrmpactr 0.1.0
Frequently asked questions
What is the difference between mpactr and rollupTree?
They serve adjacent needs but don't currently overlap on shipped themes. mpactr and rollupTree are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is mpactr better than rollupTree?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. mpactr and rollupTree are shipping at a similar cadence (velocity 0.0 vs 0.0, both within Sparkpulse's "active" band). For your specific use case, the alternatives sections above list other Infra & APIs products to evaluate alongside.
What are the best alternatives to mpactr?
Top mpactr alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "mpactr alternatives" section above for the current picks, or visit /alternatives/mpactr for the full list with editorial commentary on each.
What are the best alternatives to rollupTree?
Top rollupTree alternatives in Infra & APIs are ranked by recent ship velocity. Browse the "rollupTree alternatives" section above for the current picks, or visit /alternatives/rolluptree for the full list with editorial commentary on each.