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Comparison · Collab
SiYuan vs Zettlr
A side-by-side editorial comparison of SiYuan and Zettlr — release velocity, themes, recent moves, and the top alternatives to consider.
SiYuan vs Zettlr: at a glance
What is SiYuan?
SiYuan 3.8.9 reaches RC, adding AI-agent extraction of images embedded in PDFs.
SiYuan moved 3.8.9 from beta.6 to rc.1 on Oct 28. The RC's only new item is AI-agent extraction of images embedded in PDFs; the rest of its long list matches beta.5's cumulative notes: pinned agent sessions, backlink filtering by database fields, block-reference collection through database automation, resizable table rows, mind-map themes and node copy/paste, TIFF previews and macOS proxy detection.
What is Zettlr?
A markdown editor grinding through polish, with custom shortcuts finally landing after years
Zettlr is a desktop markdown editor for academic and long-form writing, releasing roughly monthly. The recent line is dominated by file-manager work — workspace sorting, folder colors, closing all standalone files, more reliable folder opening — alongside citation quality improvements and a visual indicator for long-running tasks such as PDF export. Version 4.7.0 finally added user-definable custom shortcuts, described as a years-old request. Two releases in the window are explicitly framed as fixing rather than adding, including regressions from an editor codebase transition.
SiYuan vs Zettlr: editorial side-by-side
SiYuan
5.0COLLAB
SiYuan 3.8.9 reaches RC, adding AI-agent extraction of images embedded in PDFs.
◆ Current state
SiYuan moved 3.8.9 from beta.6 to rc.1 on Oct 28. The RC's only new item is AI-agent extraction of images embedded in PDFs; the rest of its long list matches beta.5's cumulative notes: pinned agent sessions, backlink filtering by database fields, block-reference collection through database automation, resizable table rows, mind-map themes and node copy/paste, TIFF previews and macOS proxy detection.
◆ Where it's heading
The 3.8.x line keeps turning databases and mind maps into structured tools that act on the block graph, and the built-in agent is gaining reach into document content such as PDFs. The release cadence is fast and noisy, with most builds repeating the same cumulative notes.
◆ Prediction
A stable 3.8.9 is likely within days, with little added beyond fixes now that it has reached RC.
Zettlr
2.5COLLAB
A markdown editor grinding through polish, with custom shortcuts finally landing after years
◆ Current state
Zettlr is a desktop markdown editor for academic and long-form writing, releasing roughly monthly. The recent line is dominated by file-manager work — workspace sorting, folder colors, closing all standalone files, more reliable folder opening — alongside citation quality improvements and a visual indicator for long-running tasks such as PDF export. Version 4.7.0 finally added user-definable custom shortcuts, described as a years-old request. Two releases in the window are explicitly framed as fixing rather than adding, including regressions from an editor codebase transition.
◆ Where it's heading
This is a mature application paying down the cost of a rewrite while filling in the ergonomics its users have accumulated requests for. The file manager has been the focus across four consecutive releases, which suggests navigation was the friction point users complained about most. Security fixes appear repeatedly and are notable in kind rather than volume: escaping path names passed to shell commands during export closed a path to unintended command execution. Nothing here changes what the product is — it makes the existing product less irritating.
◆ Prediction
Expect the file manager and editor-transition regressions to keep absorbing releases, with custom shortcuts likely to grow configuration surface now that the mechanism exists.
Alternatives to SiYuan and Zettlr
Other Collab products tracked by Sparkpulse, ranked by recent ship velocity. Each card links to a full editorial trajectory and lets you pivot into a head-to-head comparison with either SiYuan or Zettlr.
KACE
KACE extends its PHP2SHELL fix to the SDA deployment appliance, six days after disclosure.
Mattermost
Mattermost v12 puts user-scoped permissions, private models and audit trails on every agent action.
AFFiNE
AFFiNE's canaries stay on upkeep: a Swift Collections bump follows CVE and migration fixes.
Teable
Teable's Structured Query v2 now reports across multi-hop relations, with a strict mode against SQL.
Readwise
Readwise splits its bundle into Reader-only and Highlights-only plans and renames its first app.
See all SiYuan alternatives → · See all Zettlr alternatives →
Recent activity from SiYuan and Zettlr
Latest ship moves from both products, interleaved chronologically. ⚡ = editorial spark.
- 1d agoSiYuanSiYuan 3.8.9 RC1: AI agent extracts images from PDFs
- 1d agoSiYuanSiYuan 3.8.9 beta 6 (same notes as beta 5)
- 2d agoSiYuanSiYuan 3.8.9 beta 5: full notes incl. pinned agent sessions
- 2d agoSiYuanSiYuan 3.8.9 beta 4 improves LaTeX paste and import
- 2d agoSiYuanSiYuan 3.8.9 beta 3 (same notes as beta 1)
- 2d agoSiYuanSiYuan 3.8.9 beta 2 (same notes as beta 1)
- 3mo agoZettlrZettlr 4.7 adds long-requested custom shortcuts
- 4mo agoZettlrZettlr 4.6 fixes regressions from the editor transition
- 5mo agoZettlrZettlr 4.5 adds a long-running task indicator
- 6mo agoZettlrZettlr 4.4 improves the file manager and security model
- 7mo agoZettlrZettlr 4.3.1 escapes shell paths during export
- 7mo agoZettlrZettlr 4.3 adds workspace sorting and folder colors
Frequently asked questions
What is the difference between SiYuan and Zettlr?
They serve adjacent needs but don't currently overlap on shipped themes. SiYuan is currently shipping more aggressively (velocity 5.0 vs 2.5), with 0 editorial sparks in the last 30 days against 0. See the at-a-glance table above for a side-by-side breakdown of velocity, recent sparks, and editorial themes.
Is SiYuan better than Zettlr?
Sparkpulse doesn't pick a winner — we score release velocity, not feature parity. SiYuan is currently shipping more aggressively (velocity 5.0 vs 2.5), with 0 editorial sparks in the last 30 days against 0. For your specific use case, the alternatives sections above list other Collab products to evaluate alongside.
What are the best alternatives to SiYuan?
Top SiYuan alternatives in Collab are ranked by recent ship velocity. Browse the "SiYuan alternatives" section above for the current picks, or visit /alternatives/siyuan for the full list with editorial commentary on each.
What are the best alternatives to Zettlr?
Top Zettlr alternatives in Collab are ranked by recent ship velocity. Browse the "Zettlr alternatives" section above for the current picks, or visit /alternatives/zettlr for the full list with editorial commentary on each.